Three Bay Cruise Including Blue Lagoon from Mellieha

Malta’s Coastal Charm Unveiled: A Detailed Look at the Three Bay Cruise from Mellieha

If you’re dreaming of spending a day on the water exploring Malta’s famous beaches and hidden coves, the Three Bay Cruise including the Blue Lagoon offers a fantastic way to do it. Starting from Mellieha, this 6-hour adventure takes you along Malta’s northern coast, visiting three of the archipelago’s most photogenic spots—Blue Lagoon, Crystal Lagoon, and Alfa Rock Bay—with plenty of chances to swim, snorkel, or simply relax on deck. For $46.26 per person, it’s a well-priced way to experience some of Malta’s best seaside scenery, especially if you’re short on time but want a taste of island life on the water.

What we love most about this trip is how well-paced it is. The duration of about six hours strikes a great balance, giving enough time at each stop without feeling rushed. Plus, the friendly crew helps create a relaxed, welcoming atmosphere that makes the whole day enjoyable. Another highlight is the variety of scenery—from the famous turquoise waters of the Blue Lagoon to the quieter, more secluded Alfa Rock Bay—making this cruise ideal whether you’re there for stunning views, snorkeling, or just enjoying the breeze.

One thing to keep in mind is that to step ashore at the Blue Lagoon, you’ll need a government-issued access pass, which requires planning in advance. Without this, you can still enjoy the cruise but won’t be able to disembark at Blue Lagoon itself. This regulation is important to consider, especially during busy seasons when passes are limited. This tour suits travelers who want a relaxed day on the water, love swimming in clear waters, and value authentic, scenic experiences over crowded tourist spots.

Key Points

• Balanced itinerary: Three stops allow enough time to enjoy each location without feeling rushed.
• Excellent value: At around $46, this cruise offers a lot of scenic and recreational benefits.
• Diverse scenery: From turquoise lagoons to secluded coves, each spot provides a unique experience.
• Good for swimmers and snorkelers: Multiple swim stops make this ideal for water lovers.
• Advance passes required: Disembarking at Blue Lagoon necessitates prior planning and government approval.
• Passes fill quickly: Book early, especially if you want to step ashore at Blue Lagoon.

Exploring the Full Experience: A Closer Look at the Itinerary

Starting Point: Mellieha’s Marfa Jetty

The adventure begins in the morning at Marfa Jetty in Mellieha. This is a convenient, near-public-transportation spot, so getting there is straightforward for most travelers staying nearby. Boarding typically closes about 20 minutes beforehand, so arriving a little early helps avoid any last-minute stress. The boat itself is equipped with basic amenities, including toilets and showers, making the trip comfortable. A small cash bar offers snacks and drinks, which can be handy after cooling off in the water or just for enjoying the ride.

First Stop: The Blue Lagoon

As we set sail along Malta’s striking northern coast, the first highlight is Blue Lagoon in Comino. This is the star of the tour, famous for its crystal-clear, turquoise waters and white sandy seabed. It’s not just a pretty face—the lagoon is teeming with marine life, making it perfect for snorkeling. The roughly 1.5 to 2 hours here are ideal for a leisurely swim, sunbathing, or just strolling along the shoreline.

Reviews underscore how memorable this stop is. One traveler, Sean, noted, “This was a nice version of the boat tours in Malta. We were able to stop in 3 locations and spend enough time in each without feeling rushed.” The fact that the boat anchors close to the shoreline offers a convenient way to hop in and out of the water. For those keen on exploring, the lagoon’s transparent waters reveal colorful fish and interesting underwater formations—an authentic treat for snorkelers.

Second Stop: Crystal Lagoon

After soaking up the Blue Lagoon, we move to Crystal Lagoon on Comino’s west side, where we stop for about an hour. This location is a diver’s paradise, with impressive turquoise waters surrounded by towering cliffs. It’s a quieter alternative to Blue Lagoon, ideal if you’re looking for a more sheltered spot or want to avoid the crowds. The stunning 360-degree views and the opportunity to explore sea caves make it a favorite among snorkelers and adventurers.

Danièle, another guest, described it as “posti spettacolari, lunghe soste per tuffi e divertimento o relax in barca,” which translates to “spectacular places, long stops for jumps and fun or relaxing on the boat.” The sheltered nature of the lagoon means calmer waters, safer for young children or less experienced swimmers.

Third Stop: Alfa Rock Bay

Next, the cruise heads to Alfa Rock Bay in Gozo, a lesser-known gem. Sitting on the edge of a tiny cove, this deserted islet boasts a pebble beach and pristine surroundings. It’s perfect for a final swim, usually lasting around an hour. You’ll find this spot less crowded than the lagoons, so it’s an excellent chance to relax in peace.

Guests appreciate its secluded vibe. As one reviewer expressed, “it retains its charm when other bays become very busy during the summer season,” making it a lovely spot for some quiet time before heading back.

Return Journey: Scenic Highlights

On the way back, the boat passes by Santa Maria Caves and the impressive Elephant Head rock formation. These natural features are wonderful for photos and add a sense of adventure to the journey. The cruise concludes back at Marfa Jetty, where the day began.

Practical Tips for the Trip

• Obtain your Blue Lagoon access pass in advance via the official government website, blcomino.com, especially if you want to step ashore. Remember, passes are limited and fill quickly, so plan ahead.
• Arrive early to ensure a smooth boarding process, as boarding closes 20 minutes before departure.
• Bring essentials: swimwear, towels, sunscreen, and perhaps a waterproof camera.
• Snorkeling gear is recommended if you want to explore underwater life more closely.
• Food and drinks are available for purchase on the boat, but you might want to bring your own snacks, especially if you’re hungry after swimming.
• Consider your mobility: this tour is not suitable for those with mobility impairments or those prone to seasickness due to the boat’s movement.

What Reviewers Say

The feedback from past travelers reveals why this tour is popular. Sean called it a “great day on the water,” appreciating the adequate time at each stop and the friendly crew. Danièle enjoyed the long stops for swimming and fun, highlighting how the scenic locations keep the experience lively yet relaxed.

Most agree that the scenery is stunning, with some noting it surpasses expectations for a day trip. The value is also a common compliment—$46.26 per person for a full day of scenic cruising and swimming is hard to beat.

Final Thoughts: Who Is This Tour Best For?

This cruise suits water lovers who enjoy swimming, snorkeling, and relaxing in beautiful settings. It’s well-suited for those who appreciate authentic, less commercialized spots—like Alfa Rock Bay—and are willing to plan ahead for Blue Lagoon’s entry pass. The tour is ideal for travelers who want a balanced mix of sightseeing, swimming, and scenic cruising without feeling overwhelmed by crowds or overly structured schedules.

If you’re after a day of breathtaking views, quiet coves, and a friendly atmosphere, this is a fantastic way to spend part of your Malta holiday. It’s especially appealing for those who value authentic experiences and want to see the islands from the water, with plenty of opportunities to relax and soak up the sun.

Frequently Asked Questions

Do I need a government-issued pass to go ashore at Blue Lagoon?
Yes, starting in May 2025, you must obtain an access pass from blcomino.com to disembark at Blue Lagoon. The passes are limited and should be secured in advance to avoid disappointment.

Can I bring my own food and drinks?
While the boat has a small cash bar offering snacks and beverages, you might prefer to bring your own, especially if you have specific dietary needs or want more substantial snacks after swimming.

How long is each swimming stop?
The Blue Lagoon stop lasts about 1.5 to 2 hours, while the Crystal Lagoon and Alfa Rock Bay stops are around one hour each. This provides ample time for swimming, sunbathing, or exploring.

Is this tour suitable for children?
Yes, generally, but keep in mind that the tour is not recommended for travelers with mobility impairments or those prone to seasickness. Young swimmers will enjoy the clear waters, but always supervise children during water activities.

What’s included in the price?
The price covers the scenic cruise, three swim stops, a return trip passing scenic caves and the Elephant Head rock, and onboard facilities like toilets and showers.

What if the weather is bad?
If weather conditions prevent the trip from going ahead, you will be offered a reschedule or a full refund. The tour provider closely monitors weather, and safety is their top priority.

In essence, the Three Bay Cruise from Mellieha offers an authentic, relaxing way to explore Malta’s best waters. With stunning scenery, friendly service, and reasonable pricing, it’s especially suited for travelers eager to enjoy Malta’s marine beauty without the hassle of crowded beaches or complicated logistics. Whether you’re a seasoned snorkeler or just looking to soak up some sun, this cruise makes for a memorable Maltese adventure.