Mellieha is a fantastic starting point for Boat Tours & Cruises, especially if you want to experience Malta’s stunning coastline, crystal-clear waters, and charming islands like Comino and Gozo. The calm waters of Mellieha Bay make it an ideal launchpad for small-group adventures, scenic day trips, or even private charters. Whether you’re after a relaxing cruise, snorkeling in pristine lagoons, or a high-energy jet ski ride, Mellieha offers a variety of options that cater to different tastes and budgets. We particularly like the Blue & Crystal Lagoons Cruise with Sea Caves for its intimate atmosphere and excellent reviews, or the Full Day Sailing Charter for those seeking a private, full-day escape on a well-equipped sailboat.
For travelers keen on exploring Malta’s coastlines, the Comino & Gozo: Blue & Crystal Lagoons Cruise with Sea Caves stands out for its detailed itinerary and highly-rated experience. If you prefer a short, fun-packed trip, the Comino Splash & Dash Private Boat Tour offers a quick yet comprehensive taste of Comino’s best spots. And if you’re after a special sunset experience, the Blue Lagoon Sunset Cruise provides a memorable way to end your day with a glass of prosecco and calming music. Now, let’s dive into each tour to see what makes them unique and help you pick the best fit.
1. Comino & Gozo: Blue & Crystal Lagoons Cruise with Sea Caves
At number 1 on our list, the Comino & Gozo: Blue & Crystal Lagoons Cruise with Sea Caves offers a 3-4 hour journey that balances scenic cruising with plenty of opportunities for swimming and snorkeling. The small vessel, limited to 25 passengers, ensures a more personal experience, avoiding the crowds common on larger boats. Your day includes stops at the Blue Lagoon, Crystal Lagoon, and Santa Marija Bay, as well as visits to sea caves and remarkable rock formations. The itinerary features 14 different sightseeing and swimming stops, including Mgarr Harbour and San Niklaw Bay, making sure you see plenty of Malta’s coast in one trip.
Guests consistently praise the intimacy of the tour, the friendly crew, and the stunning scenery. One reviewer noted, “The locations are amazing and the cave tours incredible,” and many mention how the small group size makes for a more relaxed day. This tour is ideal for travelers who want detailed, small-group exploration with lots of swimming in clear waters. The price reflects the personalized service and intimate experience, making it great value for those wanting a more exclusive cruise.
Bottom Line: Perfect for small groups and adventure lovers, this cruise combines scenic beauty with personalized service.
2. Mellieha: Gozo, Comino, Sea Caves, and Blue Lagoon Cruise
At number 2, the Mellieha: Gozo, Comino, Sea Caves, and Blue Lagoon Cruise takes a 4-hour journey across Malta’s most iconic sights. Starting from Cirkewwa, this tour explores the crystalline waters of the Lagoon, snorkeling spots, and sea caves along the coast of Comino and Gozo. The stops at Crystal Lagoon and Blue Lagoon are highlights, offering plenty of time for swimming and relaxing in the famous turquoise waters.
What makes this tour stand out is its combination of sightseeing with active options like snorkeling, and the chance to see Santa Maria Caves and Elephant Rock. Guests often comment on the friendly crew and the well-organized schedule. One reviewer said, “Excellent service and the locations are amazing.” It’s a perfect choice for those who want a balance of sightseeing and swimming, with a good-value price point.
Bottom Line: A well-rounded tour for active travelers eager to explore Malta’s most beautiful lagoons and caves.
3. From Mellieha: Three Bay Cruise including the Blue Lagoon
Number 3 on our list, the Three Bay Cruise including the Blue Lagoon offers a six-hour day suitable for those who want a full experience. The tour includes swimming in the Crystal Lagoon and Blue Lagoon, plus relaxation at Halfa Rock Bay. It is highly rated for comfort, with guests praising the smaller boat and friendly staff. This trip is all about soaking up the sun, snorkeling, and enjoying scenic coastal views.
Guests mention that during the day, the boat’s size allows for a more intimate experience, and the stops are well-paced. One traveler said, “The staff are all very friendly, and the locations are stunning.” The downside might be the longer duration for those with tight schedules, but it’s ideal for those wanting a comprehensive, leisurely day on the water.
Bottom Line: Great for travelers wanting a full day of swimming, sunbathing, and scenic cruising in a comfortable setting.
4. Comino Blue Lagoon & Crystal Lagoon – 3 Bay Cruise
Number 4, the Comino Blue Lagoon & Crystal Lagoon – 3 Bay Cruise is a 6-hour adventure that explores three stunning bays, including the famous Blue Lagoon and the less crowded Gebla Tal Halfa. The boat, with a capacity of 70 but limited to 45 for comfort, offers ample space to relax or swim. The itinerary includes visits to Santa Maria Caves, Elephant Rock, and Cominotto Island, with plenty of time for snorkeling and exploring.
Reviews highlight the comfort and well-organized nature of the trip: “Views are breathtaking and the water colors unforgettable.” It’s suited for families and groups who want a relaxed, extensive tour with opportunities for water activities and sightseeing.
Bottom Line: A comfortable, extensive cruise perfect for those who value space and scenic variety.
5. Comino: Blue Lagoon, Crystal Lagoon and Sea Caves Boat Tour
Number 5 takes a 3-4 hour trip around Comino, visiting the Blue Lagoon, Crystal Lagoon, and Santa Maria Bay. The small boat, with just 24 on board, offers an intimate way to explore some of Malta’s most iconic spots. The tour includes snorkeling, marine life viewing, and scenic cruising, with stops at Elephant Rock and Santa Maria Caves.
Reviewers mention that having fewer people makes a big difference; one said, “It was very beautiful, and the boat was small enough to get into caves others can’t access.” This tour appeals to those wanting to avoid crowds while enjoying detailed exploration of Malta’s coastal gems.
Bottom Line: Ideal for small groups seeking personal attention and access to caves and less crowded beaches.
6. From Mellieha Bay: Gozo & Blue Lagoon Boat Tour w/ Swim Stop
Number 6 offers a 6.5-hour full-day experience exploring Malta, Gozo, and Comino. Starting from Mellieha Bay, this tour includes a walk through Gozitan citadels, exploring caves, and swimming at the Blue Lagoon. The itinerary emphasizes the scenic beauty of the archipelago and offers plenty of time for swimming, snorkeling, and relaxing onboard.
Reviews highlight the relaxed atmosphere and friendly crew: “We loved the views and the friendly guides,” and many appreciate the flexible timing for swimming and sightseeing. It’s particularly suitable for travelers who want to see multiple islands in one day.
Bottom Line: Great for those looking for a comprehensive tour with cultural stops and plenty of water activities.
7. Mellieha: Jet Ski Rental with Safety Boat
Number 7 is the Jet Ski Rental, where you get to speed across Mellieha’s waters on a brand-new Sea-Doo GTX 130 or GTX Pro 2024. For around 30 minutes, you can enjoy the thrill of riding solo or with a passenger. The activity includes a safety briefing and the reassurance of a safety boat nearby.
Reviewers note the friendly staff and the fun factor: “They gave us extra time and took some photos,” says one. This is perfect for adrenaline junkies or those wanting a quick, fun side adventure. It’s a straightforward, high-energy way to enjoy Malta’s waters.
Bottom Line: Best suited for thrill-seekers wanting a quick, exciting experience without the need for a full boat cruise.
8. Mellieha: Round Comino, Blue Lagoon & Gozo Cruise with Water
Number 8 offers a 4-hour scenic cruise visiting the Blue Lagoon, Crystal Lagoon, and Elephant Rock, with plenty of swimming and snorkeling. The boat passes by Gozo, providing picturesque views along the way, and includes a water slide, making it appealing to families and active travelers.
Guests love the relaxed pace and the chance to see various islands in one trip. One reviewer wrote, “The views are amazing, and the water slide added extra fun.” It’s an accessible option for families or those short on time but still wanting a full day of exploration.
Bottom Line: Fun, family-friendly, and perfect for a quick but varied boat experience.
9. From Mellieha Bay Malta: Blue Lagoon Sunset Cruise
Number 9, the Blue Lagoon Sunset Cruise, is a 1-day experience designed for a romantic or relaxing evening. Departing at 4 PM, it includes a 1.5-hour swim at Blue Lagoon, followed by watching the sunset with complimentary prosecco, music, and a chilled atmosphere.
Reviewers mention how peaceful and memorable this trip is, especially for avoiding daytime crowds. It’s perfect for couples or anyone wanting a scenic, less hectic experience at the end of the day.
Bottom Line: Ideal for a relaxing, scenic, and romantic way to end your trip with spectacular views and a glass of prosecco.
10. Comino: Mystic Caves, Blue and Crystal Lagoon Boat Cruise
Number 10 offers a quick 1-hour private boat tour around Comino, perfect if you want a personalized experience. The boat visits the Mystic Caves, Blue Lagoon, and Cominotto Island, with stops for swimming and snorkeling. Passengers enjoy the comfort of a private boat, canopy, and snorkeling gear.
Reviewers comment on the calm, cozy atmosphere: “Very nice outing, and the skipper was very friendly,” and note how their private boat trip allowed access to caves others couldn’t reach. This tour suits travelers who want a quick, intimate exploration.
Bottom Line: Perfect for those seeking a private, flexible, and intimate experience on the water.
11. Malta, Gozo, Comino: Full Day Sailing Charter
Number 11 is an 8-hour full-day sailing adventure. Sail on a 14-meter boat with a professional skipper and enjoy swimming, kayaking, paddleboarding, or just relaxing. The tour emphasizes crystal-clear waters and soaring cliffs, offering a luxurious and customizable day out.
Guests rave about the attentiveness of the crew and the private nature of the experience. One reviewer said, “Everything was perfect, and Peter took us to incredible places.” It’s suited for those wanting a private, high-end day at sea with plenty of flexibility.
Bottom Line: Ideal for travelers seeking a luxurious, private sailing day with personalized stops.
12. Malta, Gozo, Comino: Half Day Sailing Charter
Number 12 offers a 4-hour private sailing experience, similar to the full day but in half the time. It includes relaxing in scenic spots, swimming, and snorkeling, with the ability to customize your route and activities.
Guests appreciated the flexibility and friendly crew: “Peter was very welcoming, and we had an excellent trip,” and many enjoyed the barbecue onboard. It’s perfect for those who want a taste of sailing without committing a full day.
Bottom Line: Flexible, private, and suitable for a quick yet personalized sailing adventure.
13. Comino Splash & Dash: Private Blue/Crystal Lagoon Boat Tour
Number 13, the Splash & Dash Private Tour offers a 2-hour personalized exploration of Comino’s caves, beaches, and lagoons. The private boat allows for swim breaks at the Crystal Lagoon and Blue Lagoon, with options for snorkeling, paddleboarding, and relaxing on secluded beaches.
Reviewers love the personalization: “Captain adapts to his customers,” and mention that the private nature allows access to caves others can’t reach. It’s great for couples or small groups wanting a flexible and exclusive experience.
Bottom Line: A short, personalized tour perfect for those wanting to explore at their own pace.
14. Malta, Comino, Blue Lagoon & Crystal Lagoon: 4-hour Cruise
Number 14 offers a 4-hour cruise that takes you to Blue Lagoon, Crystal Lagoon, and other scenic spots. The cruise is comfortable, with multiple snorkeling stops, and includes scenic views of the coastlines and islands.
One reviewer said, “Swim into the crystal depths or relax on the boat,” which highlights this tour’s balance of activity and leisure. It’s suitable for travelers short on time wanting an efficient yet scenic experience.
Bottom Line: Efficient, scenic, and great for a half-day escape with plenty of swimming.
15. Malta: North Coast, Blue Lagoon, and Comino Boat Tour
Number 15 is a 5-hour tour that explores the North Coast and Elephant Rock, with stops at the Blue Lagoon and St. Paul’s Island. Its small group size and focus on the scenic beauty of the north coast make it a quieter, more relaxed alternative.
Reviewers highlight the fun swim stops and the beautiful scenery. One said, “It was a perfect Monday afternoon on the water,” making it appealing for those looking for a laid-back, scenic experience.
Bottom Line: Perfect for travelers who want a relaxing day with scenic views and fewer crowds.
$83 per person
16. Comino and Blue Lagoon Private Boat
Finally, the Comino and Blue Lagoon Private Boat offers a fully customizable, private experience. You can choose your starting point and route, with the skipper providing engaging commentary.
Reviews mention the flexibility and personalized attention: “Very nice outing, captain adapts to clients,” and it’s suited for those wanting total control over their day. With options from 1 to 3 hours, it’s perfect for a tailored, intimate adventure.
Bottom Line: The ideal choice for those seeking a private, customized boat trip with total flexibility.
How to Choose Your Perfect Boat Tour in Mellieha
When selecting a boat tour, consider your budget, available time, and interests. If you want a luxurious private day, the Full Day Sailing Charter or Private Boat options are excellent choices. For families or small groups wanting a fun, active day, look at the Water Slide tour or the Blue Lagoon & Crystal Lagoon cruises. If your goal is to avoid crowds and explore caves, the Small Group Tours like the Comino & Gozo cruise or the Mystic Caves trip are perfect.
Booking early, especially for popular options like sunset cruises or private charters, helps secure your spot. For the best experience, aim to go during the warmer months from late spring to early autumn when the weather is most suitable for swimming.
Final Thoughts
Mellieha offers a diverse range of boat tours and cruises that cater to every taste, from intimate, small-group adventures to full-day sailing experiences. If you’re after a quick, fun ride, the Jet Ski Rental or Splash & Dash Private Tour are excellent. For those wanting to explore caves and lagoons with plenty of swimming, the Comino & Gozo Cruise or Blue Lagoon Day Trip will give you unforgettable memories.
For a truly relaxed, scenic evening, the Sunset Cruise is perfect, while private charters offer the highest level of customization. Whichever you choose, booking early will help ensure you get the experience you’re dreaming of — so don’t wait to secure your spot and make the most of Malta’s stunning coastlines.