Gozo, Malta’s smaller sister island, is a perfect spot for Boat Tours & Cruises. Its rugged coastlines, hidden caves, and crystal-clear waters make exploring by boat not just a choice but a must. We particularly love tours that blend scenic sightseeing with a touch of adventure, like the Malta: Gozo Full Day Jeep Tour with lunch and Boat Trip, which combines off-road exploration with cultural stops and a hearty meal. It’s an excellent way to see the island’s famous landmarks, from Calypso Cave to the Citadel, with the bonus of ferry transport from Malta.
Whether you’re after a relaxing cruise, a private boat experience, or an active day exploring caves and lagoons, Gozo’s boat tours offer something for all interests. The variety of options means travelers can choose based on time, budget, and preferred style—be it a shared adventure or exclusive private charter.
Quick Overview
This list features full-day jeep tours, half-day cruises, private boat charters, and special sunset trips. Each tour offers something unique, from exploring the Blue Lagoon and Crystal Lagoon on a small-group cruise (Tour #2), to private, customizable excursions (Tour #7). For a more tailored experience, check out the private boat charters that let you skip the crowds and go at your own pace.
Below, you’ll find detailed descriptions of each top-rated tour, highlighting what makes them special.
1. Malta: Gozo Full Day Jeep Tour with lunch and Boat Trip
At number 1, this 8-hour full-day tour combines off-road jeep adventures with cultural and scenic highlights. Starting from Mgarr Harbour, your guide drives you around Gozo’s valleys and tracks, with stops at Calypso Cave, Marsalforn Bay, and the Gozo Cathedral. The highlight is exploring areas few travelers see, like the Neolithic Ġgantija Temples—older than the pyramids—and the Inland Sea. Included is a hearty buffet lunch with wine, making it a well-rounded experience.
Guests praise the tour as well-organized with attentive guides like Tony. The combo of land exploration, scenic photo stops, and a boat trip makes this ideal for travelers wanting a comprehensive day without sacrificing authenticity. The ferry transport from Malta and hotel transfers add convenience, making it excellent value for a full-day adventure.
Bottom line: A perfect choice if you want a deep dive into Gozo’s sights with comfort and local flavor.
2. Gozo/Mellieha: Comino, Blue & Crystal Lagoon Half-Day Cruise
Number 2 on our list, this 4-hour cruise offers a relaxed way to explore Comino and its famed Blue Lagoon. Ideal for those short on time but wanting a taste of Malta’s waters, this tour features a smaller, more intimate boat (Tour #2) with a sundeck and canopy for comfort. You’ll glide by the Santa Maria Caves, stop at the Blue Lagoon for swimming, and explore the Crystal Lagoon—famous for its calm, clear waters perfect for snorkeling.
Reviewers comment on the friendly guide Sandra and the small group size, which enhances the experience. The inclusion of swimming, snorkeling, and scenic views makes it perfect for water lovers. It’s a straightforward, fun, and affordable way to enjoy Malta’s iconic lagoons without the crowds.
Bottom line: Best suited for travelers seeking a quick, relaxing water-based escape with excellent reviews.
3. Private Boat Charter: Gozo, Comino, Blue Lagoon, Crysral Lagoon
Number 3 offers a private experience for up to 6 people, giving you the freedom to tailor your day. The 2-hour boat includes visiting famous spots like the Blue Lagoon and Crystal Lagoon, with the option to jump in for swimming and snorkeling. The boat comes with a bottle of local Maltese wine and shaded areas, ensuring comfort.
Guests appreciate the personalized service and the flexibility to choose where to stop. This tour’s value lies in its exclusivity; you won’t be sharing the space with strangers, and your captain will focus on your interests. It’s perfect for small groups or families wanting privacy and control over their itinerary.
Bottom line: An unbeatable option for privacy, flexibility, and intimate exploration of Malta’s waters.
4. Malta: Gozo Full-Day Jeep with Lunch and Boat Transfers
This 7-hour guided jeep tour offers a deep look into Gozo’s landscape and history. Starting with hotel pickup, you’ll see the Blue Lagoon and Comino Caves if weather permits, plus stops at Salt Pans and traditional villages. Your driver shares insights into the island’s past, making the land journey both scenic and educational.
Guests praise the friendly guides, and the tour’s combination of land and sea, including optional boat visits, makes it versatile. The lunch with wine adds to the value, especially for travelers wanting a full day packed with sights and stories.
Bottom line: Great for travelers who want a guided, multi-faceted experience of Gozo with cultural and scenic highlights.
5. Malta: Blue Lagoon & Sea Caves Boat Trip & Gozo Buggy Tour
Number 5 combines a 6.5-hour jeep tour with a boat visit to the Blue Lagoon and Crystal Lagoon, plus a buffet lunch with unlimited wine. The jeep trip covers the island’s towns and caves, with stops that highlight Gozo’s real charm.
Reviews highlight the friendly guide George and the beautiful swimming spots. The tour is suitable for those who want a mix of land and water experiences, with plenty of opportunities to relax, snorkel, and take photos. It’s an excellent value for those looking for an active and scenic day.
Bottom line: Perfect for active travelers who want a comprehensive look at Gozo’s landscape plus time at the lagoons.
6. Malta: Private Boat Charter to Blue-Lagoon, Gozo & Comino
Our number 6 is a luxury private charter for up to 6 people, lasting around 4 hours. You’ll explore secluded beaches, hidden coves, and the Blue Lagoon away from crowds. The boat is well-equipped with shade and sun loungers, plus a freshwater shower.
Guests love the personalized service and the ability to customize stops. The $407 price might seem high, but it’s a fair deal for a private, flexible experience. Great for families or small groups wanting privacy and the chance to create their own adventure.
Bottom line: A premium option for privacy and exclusivity, ideal for relaxed, personalized explorations.
7. Private Boat charter to Crystal & Blue Lagoon, Caves & Comino
This 34-review, 5-star private tour offers a 3-hour trip to iconic spots like the Blue Lagoon and Santa Maria Caves. The boat can accommodate up to 15 people, with snacks like cheese and olives included. It’s perfect for families or friends wanting a relaxed yet private outing.
Guests rave about the flexibility and personalized attention from their captain, with some mentioning how the timing and stops were tailored to their wishes. The smaller group size makes it more intimate and enjoyable.
Bottom line: Best for those seeking a short, private, and customizable excursion with attentive service.
8. Half Day Blue Lagoon, Comino and Gozo Private Guided Boat Cruise
Rated 5 stars, this 4-hour private cruise focuses on exploring the lagoons and caves with a local captain. The Mgarr Harbour departure point offers scenic views, and the tour includes swimming, snorkeling, and stops at Comino’s caves and the blue waters.
Reviewers enjoy the personalized approach and the breathtaking landscapes. It’s best suited for families or small groups who want an intimate experience without the crowds.
Bottom line: An ideal option for quiet, personalized exploring of Malta’s waters.
9. Malta: Private Sunset Boat Trip to Comino and Blue Lagoon
Number 9 offers a 3-hour sunset trip. It’s perfect for those wanting to see Malta’s coast bathed in sunset colors, with stops at the Blue Lagoon and caves. The exclusive boat ensures a peaceful, romantic experience, ideal for couples or small groups.
Guests mention how the sunset views are incredible and the trip offers a more peaceful, reflective experience compared to daytime tours. It’s a splendid way to end a day.
Bottom line: Best suited for romantics or anyone wanting a serene evening view.
10. Private Boat Charter Blue Lagoon, Crystal Lagoon and Comino
This $320.99 private tour is a 3-hour cruise, perfect for small groups. The boat is equipped for cliff jumping, snorkeling, and beach lounging. The captain is praised for relaxed professionalism and customizing stops to your wishes.
Guests love how private and flexible it is, with plenty of opportunities for swimming and exploring caves. It’s suitable for active travelers wanting a personalized, immersive experience.
Bottom line: Excellent for families or friends who want a relaxed, private day on Malta’s waters.
11. Half Day Malta, Blue Lagoon, Comino & Gozo Private Boat Cruises
Rated 5 stars, this 3-hour private tour emphasizes personalized service. Starting from Mgarr Harbour, the boat visits Blue Lagoon, Crystal Lagoon, and Caves. The focus on custom stops makes it stand out.
Reviewers highlight the friendly skippers and the peaceful, exclusive experience. It’s perfect for travelers who want to avoid crowds and have a tailored adventure.
Bottom line: Designed for those who want control over their itinerary in a private setting.
12. Malta: Around Comino Cruise and Gozo Jeep Tour with Lunch
This 6.5-hour tour combines a boat cruise around Comino with a jeep safari across Gozo. Starting from Mgarr Harbour, it includes swimming at Blue Lagoon and exploring less-visited parts of Gozo. The buffet lunch with local wine rounds out the experience.
Guests note the professional guides and the balance of land and sea activities. It’s ideal for travelers who want variety and a more comprehensive look at Malta’s islands.
Bottom line: A strong pick for those seeking both adventure and cultural insights.
13. Malta: Full Day Private Boat Charter to Comino and Parts of Gozo
This 2-hour private tour is perfect for intimate groups. It focuses on swimming, snorkeling, and exploring caves. The boat is well-equipped, and captains are praised for their professional, flexible service.
Ideal for small groups wanting a relaxed, private experience with total control over stops and timing.
Bottom line: Best for small groups or families wanting a focused, private adventure.
14. Malta: City Sightseeing HOHO Bus Tour & Optional Boat Tour
Finally, the most affordable on our list, this $32 pass offers a hop-on, hop-off bus to see Malta’s top sites, with optional boat rides for additional views. It’s perfect for budget travelers or those wanting to combine land and water sightseeing.
Reviews point out the limitations of the audio guide but appreciate the easy access to key attractions like Mdina and the Three Cities.
Bottom line: An economical way to see Malta’s main sights, with the option to add a boat trip.
$32 per person
How to Choose Your Perfect Boat Tour in Gozo
When choosing between these options, think about your budget, how much time you have, and whether you prefer guided or private experiences. For example, if you want a full-day, in-depth exploration, the Malta: Gozo Full Day Jeep Tour offers great value. For those craving intimacy and personalized service, the private charters (Tour #7) or (Tour #10) are excellent choices.
If you’re seeking a quick, relaxing water experience, the Half-Day Cruise to Comino or sunset trips (Tour #9) suit your schedule. Book early during peak season, as these tours tend to fill up quickly.
To sum it up, Gozo’s boat tours range from guided jeep safaris to luxury private charters and sunset cruises. Each offers a different way to discover Malta’s stunning coastlines, caves, and lagoons. For a comprehensive day, full-length jeep tours are hard to beat. If privacy and flexibility are your priorities, the private charters are unmatched. And for a relaxed, scenic escape, the lagoon cruises fit the bill. Whatever your style, booking early ensures you won’t miss out on these fantastic experiences.