Malta: Blue Lagoon, Comino, Gozo & Crystal Lagoon Sea Caves - Who Will Love This Tour?

Which Mgarr Tours To Choose? Our Best 16 Picks

Mgarr is one of the best places in Malta for tours because of its strategic location and stunning coastal scenery. Its proximity to the Blue Lagoon and several historic sites makes it an ideal launchpad for boat adventures and cultural explorations. Whether you’re after a relaxing cruise, a private speedboat experience, or discovering Malta’s archaeological sites, Mgarr offers a variety of options. We particularly love the Malta: Comino, Blue & Crystal Lagoon, Gozo & Seacaves tour for its combination of swimming, cave exploration, and scenic cruising — all packed into just a few hours. It’s perfect if you want a taste of Malta’s famous water spots without spending the whole day at sea. Check out this experience for a well-reviewed half-day trip that balances fun and relaxation.

If you prefer something more exclusive, the Malta: Comino, Blue lagoon Private Speed Boat Tour offers the chance to explore at your own pace, visit hidden caves, and swim in crystal waters with a private guide. For a full-day adventure that combines multiple stops and family-friendly activities, the Malta Coastline Cruise: Comino, Blue Lagoon & Crystal Lagoon stands out for its relaxed vibe and generous swim stops. Whether you’re into scenic cruising, snorkeling, or just soaking up the sun, Mgarr has a tour that will fit your style.

1. Malta: Comino, Blue & Crystal Lagoon, Gozo & Seacaves

Malta: Comino, Blue & Crystal Lagoon, Gozo & Seacaves

At number 1 on our list, this tour is a crowd favorite, with a 4.7/5 rating from over 1,500 reviews. It offers a perfect mix of swimming, snorkeling, and sightseeing in just 3 to 4 hours — ideal if you want a quick yet memorable experience. The cruise starts from X8QH+6WH, where friendly staff take you around Comino, passing by Santa Marija and San Niklaw Bays. The highlight is the Blue Lagoon, where you’ll have ample time to relax and snorkel among clear waters. The itinerary also includes cave visits like the Crystal Lagoon and Comino Caves, plus scenic stops at Santa Marija Bay and Mgarr Harbour. Guests praise the balance of time spent in each location and the welcoming crew. The only drawback? Some wish for a bit more time at Blue Lagoon. This tour offers excellent value for those who want a quick taste of Malta’s best water spots with plenty of swimming and photo opportunities.

Bottom Line: An ideal choice for travelers seeking a well-organized, fun cruise with multiple swim stops and caves, all within a manageable duration.

2. Malta: Blue Lagoon, Comino, Gozo & Crystal Lagoon Sea Caves

Malta: Blue Lagoon, Comino, Gozo & Crystal Lagoon Sea Caves

At number 2 we find this tour, rated 4.6/5 from 657 reviews. Slightly longer at 4 hours, it covers many top sights, including a scenic pass by Elephant Rock, St. Marija Bay, and Mgarr Harbour. The swim stops at Blue Lagoon and Crystal Lagoon are the main attractions, with flexible times allowing plenty of snorkeling and relaxing. The tour includes a speedboat cave trip and even a water slide for extra fun. Reviewers emphasize the smooth organization and friendly crew; some mention the boat’s comfort could be improved but appreciate the overall experience. It balances adventure, sightseeing, and leisure well, making it perfect for families and solo travelers alike.

Bottom Line: Great for those wanting a comprehensive day out with multiple stops, scenic drives, and optional cave exploration, all with a friendly vibe.

3. Malta: Comino, Blue lagoon Private Speed Boat Tour

This tour ranks third, rated 5/5 from 71 reviews. It’s a private experience lasting 2 to 3 hours, perfect for intimacy and flexibility. The tour allows you to explore the Blue Lagoon and nearby caves like Santa Marija Cave, with the guide customizing the route to your preferences. The guide/Skipper, Atef, is praised for his friendly attitude and expert knowledge, making the experience more personal. Because it’s private, it’s particularly suited for small groups or couples wanting an exclusive outing without rushing. Guests mention how the trip feels relaxed yet packed with stunning scenery, including snorkeling in crystal waters. The main cave and lagoon visits are well-paced, and the price includes a shared boat for up to 9 people.

Bottom Line: Perfect for couples or small groups seeking an intimate, flexible, and scenic boat adventure; especially good if you want a personalized experience.

4. Cirkewwa/Mgarr: Blue and Crystal Lagoon Private Boat Charter

Cirkewwa/Mgarr: Blue and Crystal Lagoon Private Boat Charter

Position four goes to this private boat tour with a 4.9/5 rating from 50 reviews. It offers a 2-hour trip exploring the coastlines of Gozo and Comino. The highlight is discovering secluded beaches and hidden caves with your own captain and crew. You can enjoy snorkeling in the Blue Lagoon or Crystal Lagoon, with the option to sample some local wine on board. Guests love the flexibility of a private charter, and many mention how customizable and intimate it feels. The main drawback is the short duration, but it’s perfect if you want a quick, private escape from crowds.

Bottom Line: An excellent choice for travelers who want a tailored, private experience with plenty of time for swimming, photos, and relaxing in calm waters.

5. Malta Coastline Cruise: Comino, Blue Lagoon & Crystal Lagoon

Malta Coastline Cruise: Comino, Blue Lagoon & Crystal Lagoon

This full-day cruise ranks fifth, rated 5/5 from 26 reviews. Lasting about 5.5 hours, it’s ideal for travelers who want a leisurely day on the water with plenty of swimming and sightseeing. The boat boasts a water slide and offers stops at Paradise Bay, Santa Maria Caves, and the Blue & Crystal Lagoons. The tour emphasizes comfort, family-friendly fun, and personal service, with a relaxed pace that makes it suitable for all ages. Reviewers highlight the quality of the onboard amenities and the delightful atmosphere. A great option if you want to avoid rushing and enjoy a full day immersed in Malta’s maritime beauty.

Bottom Line: Best for families or groups looking for a longer, relaxed experience combining swimming, sightseeing, and onboard entertainment.

6. Mgarr/Cirkewwa: Comino, Gozo & Blue Lagoon Private Boat Trip

Mgarr/Cirkewwa: Comino, Gozo & Blue Lagoon Private Boat Trip

Our sixth spot is a private boat trip rated 4.9/5. It lasts around 4 hours and is ideal for exploring secluded beaches and hidden caves around Comino, Gozo, and Malta. The trip is led by a local captain, with options to swim and snorkel in the pristine waters. The tour is praised for its flexibility, allowing you to skip long lines and access less crowded spots. It’s perfect for groups wanting an exclusive, tailored experience with plenty of underwater exploration.

Bottom Line: Excellent for those who prefer a private, customizable tour focusing on off-the-beaten-path beaches and caves.

7. Mgarr/Mellieha: Gozo, Comino, Crystal & Blue Lagoon Cruise

Mgarr/Mellieha: Gozo, Comino, Crystal & Blue Lagoon Cruise

Position seven is a private boat rated 4.9/5, lasting about 2 hours. It’s suited for travelers who want a quick, customizable route to Blue Lagoon, Crystal Lagoon, and other top sites of Comino. The tour offers flexibility, allowing you to choose which caves or beaches to visit. Reviewers mention the comfortable boat and attentive guides, making it a stress-free way to see Malta’s waters. It’s ideal if you’re short on time but still want a personalized experience.

Bottom Line: Perfect for travelers with limited time who want a private, flexible tour with quality snorkeling and scenic views.

8. DiveSnap Underwater Sports Thrills: Lantern Point & P31 Wreck

DiveSnap Underwater Sports Thrills:Lantern Point & P31 Wreck

Number eight features this adventure, rated 5/5, lasting 3 hours. It’s all about exploring underwater, with snorkeling and swimming at Lantern Point and the P31 Wreck. It’s perfect for those who want to combine a boat trip with a diving or snorkeling adventure among Malta’s wrecks and caves. The guide is praised for storytelling and creating a relaxed atmosphere. Equipment is included, and the trip is customizable to your skill level.

Bottom Line: Ideal for adventurous travelers eager to explore Malta’s underwater wrecks and caves in a private setting.

9. Fisher’s Trek: Cominotto Island, Prime Fishing Spots & Gozo

Fishers Trek: Cominotto Island, Prime Fishing Spots & Gozo

Position nine goes to this fishing trip, rated 5/5. It’s a 3-hour private tour perfect for fishing enthusiasts. The skipper guides you to prime spots around Comino and Gozo, where you can catch your own dinner or just enjoy the peaceful scenery. The trip is praised for its friendly guide, Captain Mario, and the chance to relax in Malta’s calm waters. It suits travelers wanting an active, hands-on experience.

Bottom Line: Best for avid anglers or those wanting to combine fishing with sightseeing on a private boat.

10. Sunday: Ghajn Tuffieha (Riviera) Beach Yoga Class

Sunday: Ghajn Tuffieha (Riviera) Beach Yoga Class

Rating 5/5, this yoga experience is a 75-minute session on the beautiful Ghajn Tuffieha Beach. It’s perfect for travelers seeking relaxation and a mindful connection to nature. The class is led by an experienced instructor, and the peaceful setting offers the perfect backdrop for unwinding. It’s ideal for those who want a gentle, restorative activity amid Malta’s scenic beaches. Reviewers mention the fantastic location and calming atmosphere.

Bottom Line: A great choice for wellness-focused travelers wanting a peaceful, scenic yoga session.

11. Celebration Sail – Lover’s Cave, Comino, Gozo & Blue Lagoon

Celebration Sail - Lovers Cave, Comino, Gozo & Blue Lagoon

Rated 5/5, this private tour lasts about 4 hours. It’s designed for romantic or special occasions, with personalized stops at Lover’s Cave, Blue Lagoon, and other beautiful spots. Reviewers love the attentive captain and the flexibility to customize the route. It’s perfect for celebrating a birthday or anniversary with a private boat experience in a relaxed setting.

Bottom Line: Ideal for couples or small groups celebrating a special moment with a private cruise.

12. Party Prowl: Crystal Lagoon, Gozo, Santa Maria Caves, Malta

Party Prowl: Crystal Lagoon, Gozo, Santa Maria Caves, Malta

This party boat ranks 12th, rated 5/5 and lasts 4 hours. It’s geared towards lively crowds, with music and a social atmosphere. It explores Crystal Lagoon, Santa Maria Caves, and other key spots, perfect for a fun and energetic day on the water. Reviewers mention the friendly crew and great party vibe, making it ideal for groups wanting a lively experience.

Bottom Line: Best suited for travelers looking for a lively, social atmosphere with swimming and cave visits.

13. Buskett Woodlands and Dingli Cliffs Private Tour

Buskett Woodlands and Dingli Cliffs Nature Walking Private Tour

Rated 5/5, this nature walk lasts about 5 hours. Led by a qualified botanist, it takes you through Buskett Gardens and Dingli Cliffs, offering scenic views, plant identification, and cultural insights. It’s perfect for nature lovers seeking a quiet, educational walk. Reviewers praise the guide’s knowledge and the peaceful scenery.

Bottom Line: Excellent for travelers wanting an active, educational day immersed in Malta’s flora and scenic high points.

14. Malta: Good Friday Afternoon Procession Including Transport

Malta: Good Friday Afternoon Procession Including Transport

Rated 5/5, this religious procession is a unique cultural experience lasting around 3 to 4 hours. It involves watching solemn processions with statues portraying the Passion of Christ in Haz-Zebbug. Perfect for travelers interested in local traditions, it’s a deeply moving event that offers insight into Malta’s religious culture.

Bottom Line: Suitable for culturally curious travelers interested in Malta’s religious festivals.

15. Entry Ticket for The Limestone Heritage Park and Gardens

Entry Ticket for The Limestone Heritage Park and Gardens

Rated 5/5, this entry ticket offers a fascinating day of exploration in Siggiewi. It includes an audio-visual presentation, museum, and live stonework demonstrations, all centered around Malta’s famous limestone. It’s a great cultural and historical stop, especially for those interested in Malta’s geology and craftsmanship. Reviewers love the combination of education and hands-on activities.

Bottom Line: Perfect for curious travelers interested in Malta’s building heritage and stone crafts.

16. Prehistoric Temples and Highlights of the South Full-Day Tour

Prehistoric Temples and Highlights of the South Full-Day Tour

Finally, the full-day tour covers impressive archaeological sites like Hagar Qim and Mnajdra temples. Rated 4.0/5 from 25 reviews, it’s excellent for history lovers wanting a rundown of Malta’s ancient past. The guide shares detailed insights, and the combination of temples, caves, and scenic drives makes for an enriching day.

Bottom Line: Ideal for history enthusiasts or those wanting a full-day experience with a focus on Malta’s prehistoric marvels.

How to Choose the Right Tour in Mgarr

When selecting a tour in Mgarr, consider your budget, time available, and interests. For relaxed water fun, the full-day cruise offers maximum value. If you prefer a private, personalized experience, the private speedboat or private boat trip are excellent options. For cultural or historical interests, the Prehistoric Temples and Limestone Heritage tours provide deeper insight into Malta’s past.

Booking early is recommended, especially in peak seasons, to secure your spot on popular trips like the Blue Lagoon boat tours. Think about what kind of experience best suits your pace — whether it’s a quick snorkel trip, a full-day cruise, or an educational walk. Remember, many tours include snorkeling gear, and some private options even have wine or special touches.

To sum it up, Mgarr offers a wide array of tours tailored to different interests and schedules. For those seeking a quick splash of Malta’s famous waters, the half-day cruise is hard to beat. If you want a more exclusive experience, the private speedboat is perfect. And for travelers who love history and nature, the full-day archaeological or nature tours will deepen your appreciation of Malta’s diverse offerings. No matter your choice, booking early guarantees a memorable adventure in Mgarr.