Which Sandakan Boat Tours & Cruises To Choose? We Rank The 9 Best

Sandakan is one of Borneo’s best-kept secrets for boat-based adventures. Its location along the Kinabatangan River and proximity to mangrove forests make it a prime spot for wildlife watching and nighttime light shows. As we explored the options, a few stand out: the 2D1N Sandakan Private Tour with Kinabatangan River Cruise offers a comprehensive, wildlife-rich experience, perfect for those wanting a mix of orangutans and river safari. Meanwhile, the Mangrove Cruise with Fireflies Tour provides magical evenings watching fireflies dance in the mangroves—an experience you’ll never forget. For those who prefer a full day of wildlife spotting, the Kinabatangan River Cruise from Sandakan is a great choice, especially if you want to see proboscis monkeys and pygmy elephants. These tours, among others, reveal the natural beauty and biodiversity that make Sandakan a top destination for nature lovers.

This list covers a variety of experiences, from overnights deep in the jungle to quick sunset cruises. Whether you’re interested in wildlife, birdwatching, or the enchanting light displays of fireflies, there’s something here to match your style. Keep reading for in-depth reviews of each tour, so you can pick your perfect boat adventure.

1. 2D1N Sandakan Private Tour with Kinabatangan River Cruise

At number 1, this two-day private tour combines wildlife encounters with comfort and convenience. The tour begins with hassle-free pickup at Sandakan Airport, where your guide takes you straight to Sepilok Orangutan Sanctuary. This is one of the best chances to see orangutans in their natural environment, with plenty of time for photos and learning about conservation efforts. The journey then continues with a cruise on the Kinabatangan River, a highlight for wildlife enthusiasts. Along the river, you’ll spot proboscis monkeys, crocodiles, and various bird species.

What makes this tour stand out is its focus on a personalized experience. The guide’s insights, combined with the rustic lodge stay, make you feel like a guest in their world rather than just a tourist. The reviews praise the seamless logistics—no worrying about transportation or planning—and the chance to see wildlife up close. One traveler wrote, “It was an amazing tour discovering the Sepilok reserve and the nature among the river Kinabatangan.” The price of $290 per person reflects the inclusive nature of the tour, with transportation, guided wildlife viewing, and accommodations.

Bottom Line: Perfect for travelers who want a comprehensive, hassle-free trip with a good mix of orangutans, river safari, and local culture. The private setting ensures a more intimate experience, and the wildlife sightings are impressive.

2. Mangrove Cruise with Fireflies Tour Including Dinner

For around $64, the Mangrove Cruise with Fireflies Tour offers a magical evening in Sandakan. It starts with a relaxing boat ride through the mangroves at sunset, where you can enjoy the changing colors and hope for sightings of dolphins or herons. Afterward, you’ll see the fireflies lighting up the trees—a natural spectacle that rivals any fireworks display. The tour wraps up with a seafood dinner at a local bed and breakfast, making it both economical and memorable.

This tour is especially appealing for those interested in nighttime nature experiences. The boat cruise is quiet and intimate, with only your small group on the water. Travelers have praised the experience, mentioning how silent and beautiful the fireflies are, with one comment: “Very beautiful and silent and the fireflies were a great experience.” The tour includes hotel pickup and drop-off, which makes logistics simple.

Bottom Line: An excellent choice for families or couples seeking a gentle, enchanting evening—especially if you’re eager to see fireflies and enjoy local seafood.

3. Kinabatangan River Cruise from Sandakan

If you’re looking for a full-day wildlife adventure, the Kinabatangan River Cruise from Sandakan is a popular pick. Starting mid-afternoon, the tour takes you along Malaysia’s second-longest river, where the chances of spotting proboscis monkeys, orangutans, and various bird species are high. The cruise lasts about 8 hours and includes a local dinner, which adds to the authentic experience.

What makes this tour unique is its convenient pickup and drop-off service, plus the opportunity to see wildlife during both daylight and evening hours. The climate-controlled vehicle ensures comfort, and the included dinner at a local restaurant provides a taste of regional cuisine. Many reviewers highlight the success of spotting wildlife—including the “big five” of Borneo—and comment on the professionalism of the guide.

Bottom Line: Ideal for day-trippers who want a thorough, all-day exploration of the river’s fauna. It’s especially suitable for travelers with a full day to spare and a passion for spotting elusive wildlife.

4. Borneo Kinabatangan River Cruise Day Trip

Similar to the previous, the Borneo Kinabatangan River Cruise Day Trip offers a 10-hour excursion exploring the river’s biodiversity. It’s led by an English-speaking guide who shares insights into the local ecosystem. The tour includes river cruises through the Sukau-Kinabatangan Wildlife Sanctuary**, where you’ll see monkeys, orangutans, and pygmy elephants.

This tour is praised for its value for money—at $88—and the ability to customize your day with optional activities like night walks or tree planting. The reviews mention a “fantastic experience,” with sightings of crocodiles, various monkeys, and even baby orangutans. The relaxed pace and wildlife focus make it a favorite among nature lovers.

Bottom Line: A solid choice for travelers seeking a comprehensive day of wildlife viewing with the flexibility to add extra activities.

5. Sandakan: Kinabatangan River Wildlife Cruise with Lunch

For a balanced day, the Kinabatangan River Wildlife Cruise with Lunch combines a river cruise with a delicious meal at the Sukau Jungle Resort. It’s a perfect option if you want a shorter out-of-town experience without sacrificing wildlife viewing. The tour focuses on proboscis monkeys, birds, and other wildlife, with afternoon tea to relax after the cruise.

The tour’s highlights include cruising the longest river in Sabah and enjoying a local lunch, which many reviewers find to be a good value. It’s suitable for travelers who want a taste of river adventure but with a more flexible schedule or limited time.

Bottom Line: Great for wildlife enthusiasts who want a shorter, more relaxed outing with a good chance of sightings and local food.

6. Kinabatangan River 2-Day Minibus and Boat Sharing Tour

For those with extra time and a love for immersive experiences, the Kinabatangan River 2-Day Minibus and Boat Sharing Tour offers a deep dive into the rainforest. It combines overnights at the Bilit Adventure Lodge with scenic river cruises and optional activities like night walks or tree planting.

This tour’s strength lies in its focus on biodiversity and natural exploration. Reviewers highlight how they saw dwarf elephants and various primates, sometimes missing only the rhinoceros hornbill. It’s perfect for wildlife enthusiasts who want to stay longer and explore more thoroughly.

Bottom Line: Best suited for travelers who want a multi-day adventure and are prepared for a more active, in-depth experience.

7. Sandakan: Fireflies and Mangrove Cruise with Dinner

This 5-hour tour combines a night boat cruise through mangroves with a dinner, offering an intimate experience of the jungle’s nighttime magic. It starts with a brief village tour, where you can learn about local life, then takes you to see fireflies illuminating the trees. It ends with a relaxed dinner, making it well-suited for those wanting a laid-back but mesmerizing evening.

The tour has a high rating and includes a boat cruise that’s both peaceful and visually stunning. Travelers especially enjoy the quietness of the mangroves and the natural light show of the fireflies. It’s ideal for families or couples wanting a gentle introduction to Sandakan’s nocturnal wildlife.

Bottom Line: Perfect for those seeking a gentle, enchanting evening with fireflies, complemented by a cultural village visit.

8. Sandakan: Orangutan, Sun Bear, Fireflies and Mangrove Cruise

This full-day tour packs multiple wildlife encounters, from the Bornean Sun Bear Conservation Centre to the fireflies lighting up the night. Starting with a visit to the orangutans at Sepilok, it also includes a guided village walk and a boat cruise in the mangroves. It’s a comprehensive, active day suited for those who want variety.

Reviews emphasize how much wildlife can be seen, with mentions of seeing proboscis monkeys, orangutans, and the tiny sun bears. The tour also includes a local lunch and dinner, giving a full taste of Borneo’s flavors. The itineraries are packed, so good physical condition and time are important considerations.

Bottom Line: A comprehensive day trip combining wildlife, local culture, and the enchanting fireflies—ideal for adventure-minded travelers.

9. 3D2N Kinabatangan River Cruise

Finally, the 3D2N Kinabatangan River Cruise offers an extended experience for wildlife enthusiasts. Pricing at $361.64 allows for deeper exploration, including guided jungle walks and more opportunities to spot animals like proboscis monkeys, crocodiles, and pygmy elephants.

While no reviews are available, the itinerary suggests a focus on biodiversity and relaxation. It’s best suited for travelers with extra time and a strong interest in fully seeing Borneo’s rainforest environment.

Bottom Line: Ideal for dedicated naturalists seeking a multi-day, in-depth adventure with plenty of wildlife encounters.

How to Choose the Right Boat Tour or Cruise in Sandakan

When selecting your ideal Sandakan boat tour, consider your budget, available time, and interests. For a comprehensive wildlife experience with comfort, the 2D1N Sandakan Private Tour offers a balanced mix of orangutans and river safaris. If you’re after an enchanting evening, the Fireflies Tour is hard to beat. For those with limited time but wanting a robust wildlife outing, the Kinabatangan River Cruise or the Wildlife Cruise with Lunch are excellent. Longer trips like the 3D2N are perfect for serious birders or wildlife photographers.

Booking early is recommended, especially in peak months (July to September), when these tours fill quickly. Check each experience’s details for specific inclusions, such as guides’ expertise or meal options, to match your travel style.

Sandakan offers a wide range of boat-based adventures, from intimate firefly experiences to multi-day wildlife safaris. Whether you prefer a quick evening outing or a more immersive journey, these tours highlight the natural splendor of Borneo. For the best experience, consider your interests and time constraints, and book in advance to secure your spot in the jungle’s waters.